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Corrections to: Use of the BOADICEA Web Application in clinical practice
Anne Brédart, Jean-Luc Kop, Antonis C Antoniou, Alex P Cunningham, Antoine de Pauw, Marc Tischkowitz, Hans Ehrencrona, Sylvie Dolbeault, Léonore Robieux, Kerstin Rhiem, Douglas F Easton, Peter Devilee, Dominique Stoppa-Lyonnet, Rita Schmutlzer
Jan 23, 2018
The article "Use of the BOADICEA Web Application in clinical practice: appraisals by clinicians from various countries" written by Anne Brédart · Jean‑Luc Kop · Antonis C. Antoniou · Alex P. Cunningham · Antoine De Pauw ·Marc...
Structure and evolutionary history of a large family of NLR proteins in the zebrafish.
Kerstin Howe, Philipp H Schiffer, Julia Zielinski, Thomas Wiehe, Gavin K Laird, John C Marioni, Onuralp Soylemez, Fyodor Kondrashov, Maria Leptin
Sep 08, 2018
Multicellular eukaryotes have evolved a range of mechanisms for immune recognition. A widespread family involved in innate immunity are the NACHT-domain and leucine-rich-repeat-containing (NLR) proteins. Mammals have small...
Birth, expansion, and death of VCY -containing palindromes on the human Y chromosome
Wentao Shi, Andrea Massaia, Sandra Louzada, Juliet Handsaker, William Chow, Shane McCarthy, Joanna Collins, Pille Hallast, Kerstin Howe, Deanna M. Church, Fengtang Yang, Yali Xue, Chris Tyler-Smith
Oct 13, 2020
Abstract: Background: Large palindromes (inverted repeats) make up substantial proportions of mammalian sex chromosomes, often contain genes, and have high rates of structural variation arising via ectopic recombination. As a...
Birth, expansion, and death of VCY-containing palindromes on the human Y chromosome.
Wentao Shi, Andrea Massaia, Sandra Louzada, Juliet Handsaker, William Chow, Shane McCarthy, Joanna Collins, Pille Hallast, Kerstin Howe, Deanna M Church, Fengtang Yang, Yali Xue, Chris Tyler-Smith
Nov 26, 2019
BACKGROUND: Large palindromes (inverted repeats) make up substantial proportions of mammalian sex chromosomes, often contain genes, and have high rates of structural variation arising via ectopic recombination. As a result, they...
The genome sequence of the channel bull blenny, Cottoperca gobio (Günther, 1861).
Iliana Bista, Shane A McCarthy, Jonathan Wood, Zemin Ning, H William Detrich Iii, Thomas Desvignes, John Postlethwait, William Chow, Kerstin Howe, James Torrance, Michelle Smith, Karen Oliver, Vertebrate Genomes Project Consortium, Eric A Miska, Richard Durbin
Nov 18, 2020
We present a genome assembly for Cottoperca gobio (channel bull blenny, (Günther, 1861)); Chordata; Actinopterygii (ray-finned fishes), a temperate water outgroup for Antarctic Notothenioids. The size of the genome assembly is...
The Ursinus Weekly, April 14, 1913
Lary Baker Small
Jan 01, 0001
The prize debate pleases audience Ursinus again victorious Another successful concert: Glee Club sings to appreciative audience in Philadelphia Announce artists for music festival Wedding bells again Track men getting into...
Ursinus College Collegeville Pennsylvania newspaper Schaff literary society Grace Saylor Carl Erickson track team Paul S. Howe baseball tennis YMCA YWCA cultural history Higher Education Liberal Studies Social History United States History
Published by: Ursinus College
The genome sequence of the brown trout, Salmo trutta Linnaeus 1758.
Tom Hansen, Per Gunnar Fjelldal, Sigbjørn Lien, Michelle Smith, Craig Corton, Karen Oliver, Jason Skelton, Emma Betteridge, Jale Doulcan, Olivier Fedrigo, Jacquelyn Mountcastle, Erich Jarvis, Shane A McCarthy, William Chow, Kerstin Howe, James Torrance, Jonathan Wood, Ying Sims, Leanne Haggerty, Richard Challis, Jonathan Threlfall, Daniel Mead, Richard Durbin, Mark Blaxter
Nov 17, 2021
We present a genome assembly from an individual female Salmo trutta (the brown trout; Chordata; Actinopteri; Salmoniformes; Salmonidae). The genome sequence is 2.37 gigabases in span. The majority of the assembly is scaffolded...
The genome sequence of the Norway rat, Rattus norvegicus Berkenhout 1769.
Kerstin Howe, Melinda Dwinell, Mary Shimoyama, Craig Corton, Emma Betteridge, Alexander Dove, Michael A Quail, Michelle Smith, Laura Saba, Robert W Williams, Hao Chen, Anne E Kwitek, Shane A McCarthy, Marcela Uliano-Silva, William Chow, Alan Tracey, James Torrance, Ying Sims, Richard Challis, Jonathan Threlfall, Mark Blaxter
Oct 22, 2021
We present a genome assembly from an individual male Rattus norvegicus (the Norway rat; Chordata; Mammalia; Rodentia; Muridae). The genome sequence is 2.44 gigabases in span. The majority of the assembly is scaffolded into 20...
The genome sequence of the Eurasian river otter, Lutra lutra Linnaeus 1758.
Dan Mead, Frank Hailer, Elisabeth Chadwick, Roberto Portela Miguez, Michelle Smith, Craig Corton, Karen Oliver, Jason Skelton, Emma Betteridge, Jale Doulcan Doulcan, Olga Dudchenko, Arina Omer, David Weisz, Erez Lieberman Aiden, Shane McCarthy, Kerstin Howe, Ying Sims, James Torrance, Alan Tracey, Richard Challis, Richard Durbin, Mark Blaxter
May 01, 2020
We present a genome assembly from an individual male Lutra lutra (the Eurasian river otter; Vertebrata; Mammalia; Eutheria; Carnivora; Mustelidae). The genome sequence is 2.44 gigabases in span. The majority of the assembly is...
Genomic consequences of domestication of the Siamese fighting fish.
Young Mi Kwon, Nathan Vranken, Carla Hoge, Madison R Lichak, Amy L Norovich, Kerel X Francis, Julia Camacho-Garcia, Iliana Bista, Jonathan Wood, Shane McCarthy, William Chow, Heok Hui Tan, Kerstin Howe, Sepalika Bandara, Johannes von Lintig, Lukas Rüber, Richard Durbin, Hannes Svardal, Andres Bendesky
Apr 09, 2022
Siamese fighting (betta) fish are among the most popular and morphologically diverse pet fish, but the genetic bases of their domestication and phenotypic diversification are largely unknown. We assembled de novo the genome of a...
The genome sequence of the ringlet, Aphantopus hyperantus Linnaeus 1758
Dan Mead, Ilik Saccheri, Carl Yung, Konrad Lohse, Carla Lohse, Philip Ashmole, Michelle Smith, Craig Corton, Karen Oliver, Jason Skelton, Emma Betteridge, Michael Quail, Jale Dolucan, Shane McCarthy, Kerstin Howe, Jonathan Wood, James Torrance, Alan Tracey, Sam Whiteford, Richard Challis, Richard Durbin, Mark Blaxter
Oct 22, 2021
We present a genome assembly based on an individual female Aphantopus hyperantus , also known as Maniola hyperantus (the ringlet butterfly; Arthropoda; Insecta; Lepidoptera, Nymphalidae), scaffolded using data from a second...
The gene-rich genome of the scallop Pecten maximus.
Nathan J Kenny, Shane A McCarthy, Olga Dudchenko, Katherine James, Emma Betteridge, Craig Corton, Jale Dolucan, Dan Mead, Karen Oliver, Arina D Omer, Sarah Pelan, Yan Ryan, Ying Sims, Jason Skelton, Michelle Smith, James Torrance, David Weisz, Anil Wipat, Erez L Aiden, Kerstin Howe, Suzanne T Williams
Jun 15, 2020
BACKGROUND: The king scallop, Pecten maximus, is distributed in shallow waters along the Atlantic coast of Europe. It forms the basis of a valuable commercial fishery and plays a key role in coastal ecosystems and food webs....
The genome sequence of the European golden eagle, Aquila chrysaetos chrysaetos Linnaeus 1758.
Dan Mead, Rob Ogden, Anna Meredith, Gabriela Peniche, Michelle Smith, Craig Corton, Karen Oliver, Jason Skelton, Emma Betteridge, Jale Doulcan, Nadine Holmes, Victoria Wright, Matt Loose, Michael A Quail, Shane A McCarthy, Kerstin Howe, William Chow, James Torrance, Joanna Collins, Richard Challis, Richard Durbin, Mark Blaxter
Dec 15, 2021
We present a genome assembly from an individual female Aquila chrysaetos chrysaetos (the European golden eagle; Chordata; Aves; Accipitridae). The genome sequence is 1.23 gigabases in span. The majority of the assembly is...
False gene and chromosome losses in genome assemblies caused by GC content variation and repeats.
Juwan Kim, Chul Lee, Byung June Ko, Dong Ahn Yoo, Sohyoung Won, Adam M Phillippy, Olivier Fedrigo, Guojie Zhang, Kerstin Howe, Jonathan Wood, Richard Durbin, Giulio Formenti, Samara Brown, Lindsey Cantin, Claudio V Mello, Seoae Cho, Arang Rhie, Heebal Kim, Erich D Jarvis
Sep 28, 2022
BACKGROUND: Many short-read genome assemblies have been found to be incomplete and contain mis-assemblies. The Vertebrate Genomes Project has been producing new reference genome assemblies with an emphasis on being as complete...
Working the When, Where, and Who of Social Context
Within qualitative research it is widely recognised that context matters. Despite this, in recent years a number of authors have observed a lack of contextual awareness in qualitative analysis. The purpose of this article is to...
Working the When, Where, and Who of Social Context
Within qualitative research it is widely recognised that context matters. Despite this, in recent years a number of authors have observed a lack of contextual awareness in qualitative analysis. The purpose of this article is to...
Comparative analysis of dinoflagellate chloroplast genomes reveals rRNA and tRNA genes
Background: Peridinin-containing dinoflagellates have a highly reduced chloroplast genome, which is unlike that found in other chloroplast containing organisms. Genome reduction appears to be the result of extensive transfer of...
Mind the context gap
In this review paper, we critically examine the evidence base relating to engagement within the public sector given a wide range of public services have faced acute human resource challenges over recent years. Our review of 188...
The genome sequence of the European water vole, Arvicola amphibius Linnaeus 1758.
Angus I Carpenter, Michelle Smith, Craig Corton, Karen Oliver, Jason Skelton, Emma Betteridge, Jale Doulcan, Michael A Quail, Shane A McCarthy, Marcela Uliano Da Silva, Kerstin Howe, James Torrance, Jonathan Wood, Sarah Pelan, Ying Sims, Francesca Floriana Tricomi, Richard Challis, Jonathan Threlfall, Daniel Mead, Mark Blaxter
Jun 29, 2022
We present a genome assembly from an individual male Arvicola amphibius (the European water vole; Chordata; Mammalia; Rodentia; Cricetidae). The genome sequence is 2.30 gigabases in span. The majority of the assembly is...
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