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Results: 117
Haplotype-aware graph indexes.
MOTIVATION: The variation graph toolkit (VG) represents genetic variation as a graph. Although each path in the graph is a potential haplotype, most paths are non-biological, unlikely recombinations of true haplotypes. RESULTS...
Genotyping structural variants in pangenome graphs using the vg toolkit
Glenn Hickey, David Heller, Jean Monlong, Jonas A. Sibbesen, Jouni Sirén, Jordan Eizenga, Eric T. Dawson, Erik Garrison, Adam M. Novak, Benedict Paten
Jun 06, 2020
Abstract: Structural variants (SVs) remain challenging to represent and study relative to point mutations despite their demonstrated importance. We show that variation graphs, as implemented in the vg toolkit, provide an...
Genotyping structural variants in pangenome graphs using the vg toolkit.
Glenn Hickey, David Heller, Jean Monlong, Jonas A Sibbesen, Jouni Sirén, Jordan Eizenga, Eric T Dawson, Erik Garrison, Adam M Novak, Benedict Paten
Feb 11, 2021
Structural variants (SVs) remain challenging to represent and study relative to point mutations despite their demonstrated importance. We show that variation graphs, as implemented in the vg toolkit, provide an effective means...
Genotyping structural variants in pangenome graphs using the vg toolkit.
Glenn Hickey, David Heller, Jean Monlong, Jonas A Sibbesen, Jouni Sirén, Jordan Eizenga, Eric T Dawson, Erik Garrison, Adam M Novak, Benedict Paten
Mar 15, 2020
Structural variants (SVs) remain challenging to represent and study relative to point mutations despite their demonstrated importance. We show that variation graphs, as implemented in the vg toolkit, provide an effective means...
Published by: Genome biology
The Ursinus Weekly, October 19, 1914
Welsh lecturer pleases audience The president and his wife entertain Varsity bows to Penn State team Scrubs lose second game The trees on the college campus Dr. Schumacher a benedict Literary societies College directory ...
Ursinus College Collegeville Pennsylvania newspaper Arthur Walwyn Evans Adolf Schumacher Football YMCA YWCA Zwinglian literary society Schaff literary society cultural history Higher Education Liberal Studies Social History United States History
Published by: Ursinus College
The Ursinus Weekly, January 5, 1906
Reflections on New Year Philadelphia letter Dr. Smith becomes a Benedict Ursinus Union program New Year party The John Barrett prizes 1906 Alumni Personals Important notice
Ursinus College Collegeville Pennsylvania newspaper Homer Smith YMCA cultural history Higher Education Liberal Studies Social History United States History
Published by: Ursinus College
Highest Harm Crime “Recruiters” in a London Borough
Abstract
Research Question
Can criminal recruiters be identified and ranked by crime harm levels in a London borough, and if so...
The Grizzly, May 2, 1989
Peggy Hermann, Dennis Moir, Michelle L. Grande, Katherine Grim, Veronica Algeo, Dorothy O'Malley, Neil Schafer, Kathy Bowers, Kevin Murphy, Richard P. Richter, Lora L. Hart
Jan 01, 0001
Greeks Grab Spotlight Grad. Speakers Tapped Benedict No.1 Letter: Racism! Not Just Rednecks Williams' Farewell Richter Honored ISIC's for Going Abroad The Arena: Seeking Opinions Trenton Draws First Blood U.C. Hits...
Ursinus College Collegeville Pennsylvania newspaper sororities fraternities Liz Young Odessia Rutledge Barbara Zikmund George W. Aucott Lillian E. Benedict Nelson M. Williams Richard P. Richter study abroad racial slur Albert Jean Adolphe lacrosse track team DiNardo's restaurant fundraising Campus Activities Board cultural history Higher Education Liberal Studies Social History United States History
Published by: Ursinus College
The Grizzly, May 1, 2008
Matt Flyntz, Lane Taylor, Kristi Blust, Roger Lee, Heather Turnbach, Ali Wagner, Terry Kelley, Jill Alspach, Kristin O'Brassill, Ashley McComeskey, Alex Ernst, Jason Davis, Danielle Langdon, Courtney Fox
Jan 01, 0001
Student Art Show Highlights Creativity of Students at UC Good Night, Good Luck and Goodbye to the Grizzly Pope Benedict XVI Visits Washington D.C. and NYC You Must Always Face the Curtain with a Bow Ursinus Dance Company...
Ursinus College Collegeville Pennsylvania newspaper student art dance CoSA Wismer dining hall golf cultural history Higher Education Liberal Studies Social History United States History
Published by: Ursinus College
Accurate prediction of ice nucleation from room temperature water.
Crystal nucleation is one of the most fundamental processes in the physical sciences and almost always occurs heterogeneously with the aid of a nucleating substrate. No example of nucleation is more ubiquitous and impactful than...
Random Assignment with a Smile
Abstract
Objectives
This note describes a free online portal (
A Conceptual Framework for IT Governance Mechanisms in Uganda's Higher Institutions of Learning
Poor implementation of Information Technology Governance (ITG) leads to several IT systems performing poorly. Resulting to discontinuity of services, user frustration, loss of IT investment, increased redundancy, duplication of...
Published by: IGI Global Scientific Publishing
IT Governance Maturity for Uganda's Higher Institutions of Learning
The daily application of Information Technology (IT) in public sector organizations and its positioning as a critical driver for economic growth require a focus on implementing IT governance. Despite the increasing application...
Published by: IGI Global Scientific Publishing
Conference Looks to Inspire Young Women in Public Service
Winthrop University
Jan 01, 0001
This year's conference has 26 participants who attend a variety of South Carolina colleges and universities, such as Winthrop University, the University of South Carolina, Benedict College and the College of Charleston. The...
Published by: Winthrop University
Estimating Atomic Contributions to Hydration and Binding Using Free Energy Perturbation.
We present a general method called atom-wise free energy perturbation (AFEP), which extends a conventional molecular dynamics free energy perturbation (FEP) simulation to give the contribution to a free energy change from each...
Highest Harm Crime “Recruiters” in a London Borough
Abstract: Research Question: Can criminal recruiters be identified and ranked by crime harm levels in a London borough, and if so, how long is the predictive window of opportunity for targeting them with crime prevention...
Highest Harm Crime “Recruiters” in a London Borough
Abstract: Research Question: Can criminal recruiters be identified and ranked by crime harm levels in a London borough, and if so, how long is the predictive window of opportunity for targeting them with crime prevention...
Highest Harm Crime “Recruiters” in a London Borough
Abstract: Research Question: Can criminal recruiters be identified and ranked by crime harm levels in a London borough, and if so, how long is the predictive window of opportunity for targeting them with crime prevention...
Evaluating a Framework for Implementing IT Governance in Uganda's Higher Institutions of Learning
The reliance on IT in day-to-day organization activities raises concern about how to deal with its increasing complexity. Managing IT necessitates implementing IT governance to realize the benefits of IT use. However, there is a...
Published by: IGI Global Scientific Publishing
Using geonarratives to explore the diverse temporalities of therapeutic landscapes
A growing evidence base highlights “green” and “blue” spaces as examples of “therapeutic landscapes” incorporated into people's lives to maintain a sense of well-being. A commonly overlooked dimension within this corpus of...
Acoustic Signatures of Shipping, Weather and Marine Life
Acoustic signatures of shipping, weather and marine life are relatively well constrained, but there are strong variations with their oceanographic context and human activities. We investigate two contrasted settings, for...
Using geonarratives to explore the diverse temporalities of therapeutic landscapes
A growing evidence base highlights “green” and “blue” spaces as examples of “therapeutic landscapes” incorporated into people's lives to maintain a sense of well-being. A commonly overlooked dimension within this corpus of...
Acoustic Signatures of Shipping, Weather and Marine Life
Acoustic signatures of shipping, weather and marine life are relatively well constrained, but there are strong variations with their oceanographic context and human activities. We investigate two contrasted settings, for...
Green space, health and wellbeing
This essay examines the assumptions of green space use underpinning much existing green space and health research. It considers opportunities to move the field forward through exploring two often overlooked aspects of...
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